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VMD (Visual Molecular Dynamics) is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting..


All CHPC Software Documentation has been moved:





To get details of the functionality of VMD visit the website: httpsoftware/index.php

This includes a searchable database found:

To Use:

For tcsh users, uncomment the following line in your .tcshrc:



For bash users, uncomment the following line in your .bashrc:

export PATH="/uufs/$PATH"

If running VMD via a ssh client on a PC, be sure you have X forwarding enabled and are running a X-server such as Xming or XWin32.

To start vmd:

vmd &