Useful CPPTRAJ on-line commands for several common tasks.
| Command | Description |
|---|---|
cpptraj -p <topology file> -y <trajectory file> -tl | Gives the number of frames (time) in a NETcdf trajectory file. |
cpptraj -p <topology file> -y <restart file> -x <name of the PDB to output> | Generates a PDB file from the restart file |
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