Useful CPPTRAJ on-line commands for several common tasks.
cpptraj -p <topology file> -y <trajectory file> -tl
|Gives the number of frames (time) in a NETcdf trajectory file.|
cpptraj -p <topology file> -y <restart file> -x <name of the PDB to output>
|Generates a PDB file from the restart file|
|You may also want to use visual panels to communicate related information, tips or things users need to be aware of.|
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